Pathogen: environmental/food/other sample from Sal... - BioSample - NCBI

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Pathogen: environmental/food/other sample from Salmonella enterica

Identifiers: BioSample: SAMN04217298; SRA: SRS1259686; CFSAN: CFSAN040340

Organism: Salmonella enterica
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella

Package: Pathogen: environmental/food/other; version 1.0

Attributes

strain	WAPHL-SAL-A01070
isolation source	ground turkey
source type	food
Interagency Food Safety Analytics Collaboration (IFSAC) category	turkey
collected by	United States Food and Drug Administration
collection date	2009
geographic location	USA
latitude and longitude	missing
isolate name alias	CFSAN040340
serovar	Orion
NARMS isolate number	CVM N20287
host	missing
food product origin geographic location	USA:NM
project name	GenomeTrakr; NARMS Retail Meat
sequenced by	Washington State Department of Health \| Public Health Laboratories
ontological term	turkey (ground or minced):FOODON_00002714
attribute_package	environmental/food/other
package	environmental/food/other

BioProject: PRJNA183851 Salmonella enterica
Retrieve all samples from this project

Submission: CFSAN; 2015-10-27

Antibiogram
Antibiotic	Resistance phenotype	Measurement sign	Measurement	Measurement units	Laboratory typing method	Laboratory typing platform	Vendor	Laboratory typing method version or reagent	Testing standard
amikacin	susceptible	==	2	mg/L	MIC				CLSI
amoxicillin-clavulanic acid	susceptible	<=	1/0.5	mg/L	MIC				CLSI
ampicillin	susceptible	<=	1	mg/L	MIC				CLSI
cefoxitin	susceptible	==	4	mg/L	MIC				CLSI
ceftiofur	susceptible	==	1	mg/L	MIC				CLSI
ceftriaxone	susceptible	<=	0.25	mg/L	MIC				CLSI
chloramphenicol	susceptible	==	8	mg/L	MIC				CLSI
ciprofloxacin	susceptible	<=	0.015	mg/L	MIC				CLSI
gentamicin	susceptible	==	0.5	mg/L	MIC				CLSI
kanamycin	susceptible	<=	8	mg/L	MIC				CLSI
nalidixic acid	susceptible	==	4	mg/L	MIC				CLSI
streptomycin	susceptible	<=	32	mg/L	MIC				NARMS
sulfisoxazole	susceptible	==	64	mg/L	MIC				CLSI
tetracycline	susceptible	<=	4	mg/L	MIC				CLSI
trimethoprim-sulfamethoxazole	susceptible	<=	0.125/2.4	mg/L	MIC				CLSI

Accession:: SAMN04217298
ID:: 4217298

BioProject SRA Nucleotide

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Pathogen: environmental/food/other sample from Salmonella enterica
Pathogen: environmental/food/other sample from Salmonella enterica

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biosample
predicted protein [Histoplasma mississippiense (nom. inval.)]
predicted protein [Histoplasma mississippiense (nom. inval.)]
gi|154270370|ref|XP_001536040.1|

Protein
Phegornis mitchellii voltage-dependent anion channel 2 (VDAC2) gene, intron 5
Phegornis mitchellii voltage-dependent anion channel 2 (VDAC2) gene, intron 5
gi|519668030|gb|KF299461.1|

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