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Pathogen: environmental/food/other sample from Salmonella enterica subsp. enterica serovar Typhimurium

Identifiers: BioSample: SAMN04510426; Sample name: FSIS1605565; SRA: SRS1307600

Organism: Salmonella enterica subsp. enterica serovar Typhimurium
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica

Package: Pathogen: environmental/food/other; version 1.0

Attributes

isolation source	animal-chicken-young chicken
latitude and longitude	missing
serovar	Typhimurium
collection date	2016
collected by	USDA-FSIS
geographic location	USA:MD
strain	FSIS1605565
subgroup	enterica
sub species	enterica
food product origin geographic location	USA:MD
host	Gallus gallus
project name	NARMS-FSIS Cecal
purpose of sampling	surveilliance [GENEPIO:0100004]
sequenced by	United States Department of Agriculture\|Food Safety and Inspection Service
PFGE_PrimaryEnzyme_pattern	JPXX01.2877

BioProject: PRJNA292666 Salmonella enterica
Retrieve all samples from this project

Submission: USDA FSIS, Glenn Tillman; 2016-02-23

Antibiogram
Antibiotic	Resistance phenotype	Measurement sign	Measurement	Measurement units	Laboratory typing method	Laboratory typing platform	Vendor	Laboratory typing method version or reagent	Testing standard
amoxicillin-clavulanic acid	susceptible	<=	1/0.5	mg/L	MIC				CLSI
ampicillin	susceptible	==	2	mg/L	MIC				CLSI
azithromycin	susceptible	==	4	mg/L	MIC				NARMS
cefoxitin	susceptible	==	8	mg/L	MIC				CLSI
ceftriaxone	susceptible	<=	0.25	mg/L	MIC				CLSI
chloramphenicol	susceptible	==	4	mg/L	MIC				CLSI
ciprofloxacin	susceptible	==	0.03	mg/L	MIC				CLSI
gentamicin	susceptible	<=	0.25	mg/L	MIC				CLSI
meropenem	susceptible	<=	0.06	mg/L	MIC				CLSI
nalidixic acid	susceptible	==	4	mg/L	MIC				CLSI
streptomycin	susceptible	==	4	mg/L	MIC				NARMS
sulfisoxazole	resistant	>	256	mg/L	MIC				CLSI
tetracycline	resistant	>	32	mg/L	MIC				CLSI
trimethoprim-sulfamethoxazole	susceptible	==	0.25/4.75	mg/L	MIC				CLSI

Accession:: SAMN04510426
ID:: 4510426

BioProject SRA Nucleotide

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