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Pathogen: clinical or host-associated sample from Klebsiella pneumoniae

Identifiers: BioSample: SAMN05774083; Sample name: 0000-0057-1773; SRA: SRS1693856

Organism: Klebsiella pneumoniae
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella

Package: Pathogen: clinical or host-associated; version 1.0

Attributes

latitude and longitude	Missing
isolation source	urine
collected by	Xiaomin Zhao
strain	203
geographic location	USA:Boston
collection date	2016
host disease	missing
host	Homo sapiens
Interagency Food Safety Analytics Collaboration (IFSAC) category	clinical/research, human
source type	human
host age	40
host sex	female
host subject id	Kpneumoniae-23
ontological term	urine:UBERON_0001088

BioProject: PRJNA278886
Retrieve all samples from this project

Submission: Brigham & Women's Hospital, Xiaomin Zhao; 2016-09-15

Antibiogram
Antibiotic	Resistance phenotype	Measurement sign	Measurement	Measurement units	Laboratory typing method	Laboratory typing platform	Vendor	Laboratory typing method version or reagent	Testing standard
amikacin	susceptible	<=	2	mg/L	MIC	Vitek	Biomérieux	missing	CLSI
amoxicillin-clavulanic acid	resistant	>=	32/16	mg/L	MIC	Vitek	Biomérieux	missing	CLSI
ampicillin	resistant	>=	32	mg/L	MIC	Vitek	Biomérieux	missing	CLSI
cefepime	susceptible	==	2	mg/L	MIC	Vitek	Biomérieux	missing	CLSI
cefoxitin	susceptible	<=	4	mg/L	MIC	Vitek	Biomérieux	missing	CLSI
ceftazidime	resistant	==	16	mg/L	MIC	Vitek	Biomérieux	missing	CLSI
ceftriaxone	resistant	>=	64	mg/L	MIC	Vitek	Biomérieux	missing	CLSI
ciprofloxacin	susceptible	<=	0.25	mg/L	MIC	Vitek	Biomérieux	missing	CLSI
ertapenem	susceptible	<=	0.5	mg/L	MIC	Vitek	Biomérieux	missing	CLSI
gentamicin	susceptible	<=	1	mg/L	MIC	Vitek	Biomérieux	missing	CLSI
levofloxacin	susceptible	<=	0.12	mg/L	MIC	Vitek	Biomérieux	missing	CLSI
nitrofurantoin	resistant	==	128	mg/L	MIC	Vitek	Biomérieux	missing	CLSI
piperacillin-tazobactam	susceptible	==	16/4	mg/L	MIC	Vitek	Biomérieux	missing	CLSI
tobramycin	resistant	>=	16	mg/L	MIC	Vitek	Biomérieux	missing	CLSI
tetracycline	resistant	>=	16	mg/L	MIC	Vitek	Biomérieux	missing	CLSI
trimethoprim-sulfamethoxazole	resistant	<=	16/304	mg/L	MIC	Vitek	Biomérieux	missing	CLSI
meropenem	susceptible	>=	0.25	mg/L	MIC	Vitek	Biomérieux	missing	CLSI

Accession:: SAMN05774083
ID:: 5774083

BioProject SRA Nucleotide

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