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Pathogen: clinical or host-associated sample from Escherichia coli

Identifiers
BioSample: SAMN05774084; Sample name: 0000-0057-1776; SRA: SRS1693857
Organism
Escherichia coli
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Package
Pathogen: clinical or host-associated; version 1.0
Attributes
isolate204
collected byBrigham and Women's Hospital
collection date2016
geographic locationUSA:Boston
hostHomo sapiens
host diseaseMissing
isolation sourceurine
latitude and longitudeMissing
host age62
host sexfemale
host subject idEcoli-85
BioProject
PRJNA278886
Retrieve all samples from this project

Submission
Brigham & Women's Hospital, Xiaomin Zhao; 2016-09-15
Antibiogram
AntibioticResistance phenotypeMeasurement signMeasurementMeasurement unitsLaboratory typing methodLaboratory typing platformVendorLaboratory typing method version or reagentTesting standard
amikacinsusceptible<=2mg/LMICVitekBiomérieuxmissingCLSI
amoxicillin-clavulanic acidresistant>=32/16mg/LMICVitekBiomérieuxmissingCLSI
ampicillinresistant>=32mg/LMICVitekBiomérieuxmissingCLSI
cefepimesusceptible<=1mg/LMICVitekBiomérieuxmissingCLSI
cefoxitinresistant>=64mg/LMICVitekBiomérieuxmissingCLSI
ceftazidimeresistant==16mg/LMICVitekBiomérieuxmissingCLSI
ceftriaxoneresistant==16mg/LMICVitekBiomérieuxmissingCLSI
ciprofloxacinsusceptible<=0.25mg/LMICVitekBiomérieuxmissingCLSI
ertapenemsusceptible<=0.5mg/LMICVitekBiomérieuxmissingCLSI
gentamicinsusceptible<=1mg/LMICVitekBiomérieuxmissingCLSI
levofloxacinsusceptible<=0.12mg/LMICVitekBiomérieuxmissingCLSI
nitrofurantoinsusceptible<=16mg/LMICVitekBiomérieuxmissingCLSI
piperacillin-tazobactamsusceptible==8/4mg/LMICVitekBiomérieuxmissingCLSI
tobramycinsusceptible<=1mg/LMICVitekBiomérieuxmissingCLSI
tetracyclinesusceptible<=1mg/LMICVitekBiomérieuxmissingCLSI
trimethoprim-sulfamethoxazolesusceptible<=1/19mg/LMICVitekBiomérieuxmissingCLSI
meropenemsusceptible<=0.25mg/LMICVitekBiomérieuxmissingCLSI
Accession:
SAMN05774084
ID:
5774084

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