Uncultivated Ruminococcus sp. UBA4321 genome recov... - BioSample - NCBI

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Uncultivated Ruminococcus sp. UBA4321 genome recovered from SRX290707

Identifiers: BioSample: SAMN06450711; Sample name: Ruminococcus sp. UBA4321; SRA: SRS2032850

Organism: Ruminococcus sp. UBA4321
cellular organisms; Bacteria; Terrabacteria group; Bacillota; Clostridia; Eubacteriales; Oscillospiraceae; Ruminococcus; unclassified Ruminococcus

Package: Microbe; version 1.0

Attributes

collection date	not applicable
geographic location	NULL
isolate	UBA4321
isolation source	low methane producing sheep
metagenome source	gut metagenome
sample type	metagenomic assembly
subsource note	Genome binned from sequencing reads available in SRX290707 metagenome
assembly_method	CLC de novo assembler
assembly_method_version	4.4.1
completeness_estimated	79.25%
contamination_estimated	3.28%
environmental_sample	true
genome_coverage	13.02
mapping_method	BWA (BWA-MEM)
mapping_method_version	0.7.12-r1039
metagenomic	true
quality_assessment_method	CheckM
quality_assessment_method_version	1.0.6
value	This BioSample is a metagenomic assembly obtained from the gut metagenome reads: SRR873597.

Description: Uncultivated genome recovered from an assembly of the SRX290707 metagenome.

BioProject: PRJNA348753 metagenomes
Retrieve all samples from this project

Submission: University of Queensland, Donovan Parks; 2017-02-27

Accession:: SAMN06450711
ID:: 6450711

BioProject SRA Nucleotide

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Uncultivated Ruminococcus sp. UBA4321 genome recovered from SRX290707
Uncultivated Ruminococcus sp. UBA4321 genome recovered from SRX290707

biosample
MAG: RecT family protein [Bacteriophage sp.]
MAG: RecT family protein [Bacteriophage sp.]
gi|2295356459|gb|UWH98691.1|

Protein
MAG TPA: hypothetical protein [Bacteriophage sp.]
MAG TPA: hypothetical protein [Bacteriophage sp.]
gi|2052921414|tpg|DAG42559.1|

Protein
Taxonomy Links for Protein (Select 2294904097) (1)
Taxonomy
MAG: hypothetical protein [Bacteriophage sp.]
MAG: hypothetical protein [Bacteriophage sp.]
gi|2293603388|gb|UVX73208.1|

Protein

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