Uncultivated Dehalococcoidia bacterium UBA2162 gen... - BioSample - NCBI

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Uncultivated Dehalococcoidia bacterium UBA2162 genome recovered from ERX556027

Identifiers: BioSample: SAMN06450828; Sample name: Dehalococcoidia bacterium UBA2162; SRA: SRS2031401

Organism: Dehalococcoidia bacterium UBA2162
cellular organisms; Bacteria; Terrabacteria group; Chloroflexota; Dehalococcoidia; unclassified Dehalococcoidia

Package: Microbe; version 1.0

Attributes

collection date	not applicable
geographic location	missing
isolate	UBA2162
isolation source	saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
metagenome source	marine metagenome
sample type	metagenomic assembly
subsource note	Genome binned from sequencing reads available in ERX556027 metagenome
assembly_method	CLC de novo assembler
assembly_method_version	4.4.1
completeness_estimated	84.63%
contamination_estimated	0.33%
environmental_sample	true
genome_coverage	21.76
mapping_method	BWA (BWA-MEM)
mapping_method_version	0.7.12-r1039
metagenomic	true
quality_assessment_method	CheckM
quality_assessment_method_version	1.0.6
value	This BioSample is a metagenomic assembly obtained from the marine metagenome reads: ERR599062.

Description: Uncultivated genome recovered from an assembly of the ERX556027 metagenome.

BioProject: PRJNA348753 metagenomes
Retrieve all samples from this project

Submission: University of Queensland, Donovan Parks; 2017-02-27

Accession:: SAMN06450828
ID:: 6450828

BioProject SRA Nucleotide

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Uncultivated Dehalococcoidia bacterium UBA2162 genome recovered from ERX556027
Uncultivated Dehalococcoidia bacterium UBA2162 genome recovered from ERX556027

biosample
MAG TPA_asm: Cellvibrionales bacterium UBA4451, whole genome shotgun sequencing ...
MAG TPA_asm: Cellvibrionales bacterium UBA4451, whole genome shotgun sequencing project
gi|1247200608|tpg|DGPB00000000.1|DG 00000

Nucleotide
MIGS Cultured Bacterial/Archaeal sample from alpha proteobacterium SCGC AAA024-N...
MIGS Cultured Bacterial/Archaeal sample from alpha proteobacterium SCGC AAA024-N17

biosample
Taxonomy Links for Protein (Select 2295263600) (1)
Taxonomy
MAG TPA: hypothetical protein [Bacteriophage sp.]
MAG TPA: hypothetical protein [Bacteriophage sp.]
gi|2057029641|tpg|DAO18125.1|

Protein

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