Uncultivated Alphaproteobacteria bacterium UBA6477... - BioSample

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Identifiers: BioSample: SAMN06451849; Sample name: Alphaproteobacteria bacterium UBA6477; SRA: SRS2035128

Organism: Alphaproteobacteria bacterium UBA6477
cellular organisms; Bacteria; Pseudomonadota; Alphaproteobacteria; unclassified Alphaproteobacteria

Attributes

collection date	not applicable
geographic location	Kenya
isolate	UBA6477
isolation source	feces
metagenome source	gut metagenome
sample type	metagenomic assembly
subsource note	Genome binned from sequencing reads available in SRX834629 metagenome
assembly_method	CLC de novo assembler
assembly_method_version	4.4.1
completeness_estimated	66.09%
contamination_estimated	1.37%
environmental_sample	true
genome_coverage	9.26
mapping_method	BWA (BWA-MEM)
mapping_method_version	0.7.12-r1039
metagenomic	true
quality_assessment_method	CheckM
quality_assessment_method_version	1.0.6
value	This BioSample is a metagenomic assembly obtained from the gut metagenome reads: SRR1747028.

Description: Uncultivated genome recovered from an assembly of the SRX834629 metagenome.

Uncultivated Alphaproteobacteria bacterium UBA6477 genome recovered from SRX8346...
Uncultivated Alphaproteobacteria bacterium UBA6477 genome recovered from SRX834629

biosample
GSM3495165[Accession] (3)
GEO DataSets
MAG TPA_asm: Halieaceae bacterium UBA5055, whole genome shotgun sequencing proje...
MAG TPA_asm: Halieaceae bacterium UBA5055, whole genome shotgun sequencing project
gi|1249137936|tpg|DIBJ00000000.1|DI 00000

Nucleotide
human metagenome
human metagenome
Human Microbiome Project (HMP) Metagenomic WGS Projects, deeper sequencing of the human microbiome samples: Production Phase

BioProject
BioProject Links for Protein (Select 2057057732) (1)
BioProject

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