Uncultivated bacterium UBP9_UBA1085 genome recover... - BioSample - NCBI

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Uncultivated bacterium UBP9_UBA1085 genome recovered from SRX834663

Identifiers: BioSample: SAMN06452230; Sample name: bacterium UBP9_UBA1085; SRA: SRS2035391

Organism: bacterium UBP9_UBA1085
cellular organisms; Bacteria; Bacteria incertae sedis; Bacteria candidate phyla; unclassified Bacteria candidate phyla

Package: Microbe; version 1.0

Attributes

collection date	not applicable
geographic location	Kenya
isolate	UBA1085
isolation source	feces
metagenome source	gut metagenome
sample type	metagenomic assembly
subsource note	Genome binned from sequencing reads available in SRX834663 metagenome
assembly_method	CLC de novo assembler
assembly_method_version	4.4.1
completeness_estimated	81.94%
contamination_estimated	0.00%
environmental_sample	true
genome_coverage	9.7
mapping_method	BWA (BWA-MEM)
mapping_method_version	0.7.12-r1039
metagenomic	true
quality_assessment_method	CheckM
quality_assessment_method_version	1.0.6
value	This BioSample is a metagenomic assembly obtained from the gut metagenome reads: SRR1747062.

Description: Uncultivated genome recovered from an assembly of the SRX834663 metagenome.

BioProject: PRJNA348753 metagenomes
Retrieve all samples from this project

Submission: University of Queensland, Donovan Parks; 2017-02-27

Accession:: SAMN06452230
ID:: 6452230

BioProject SRA Nucleotide

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Uncultivated bacterium UBP9_UBA1085 genome recovered from SRX834663
Uncultivated bacterium UBP9_UBA1085 genome recovered from SRX834663

biosample
RAPGEF1 Rap guanine nucleotide exchange factor 1 [Homo sapiens]
RAPGEF1 Rap guanine nucleotide exchange factor 1 [Homo sapiens]
Gene ID:2889

Gene
MAG TPA_asm: Bacteriophage sp. isolate ctPOY12, partial genome
MAG TPA_asm: Bacteriophage sp. isolate ctPOY12, partial genome
gi|2056829609|tpg|BK043910.1|

Nucleotide
MAG TPA_asm: Bacteriophage sp. isolate ct2lf10, partial genome
MAG TPA_asm: Bacteriophage sp. isolate ct2lf10, partial genome
gi|2056758060|tpg|BK045465.1|

Nucleotide
Taxonomy Links for Protein (Select 2293616681) (1)
Taxonomy

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