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BioSample

National Center for Biotechnology Information

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Uncultivated Klebsiella pneumoniae UBA7610 genome recovered from SRX823159

Identifiers: BioSample: SAMN06454434; Sample name: Klebsiella pneumoniae UBA7610; SRA: SRS2034646

Organism: Klebsiella pneumoniae
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella

Package: Microbe; version 1.0

Attributes

collection date	not applicable
geographic location	USA:New York City
isolate	UBA7610
isolation source	metal
metagenome source	terrestrial metagenome
sample type	metagenomic assembly
subsource note	Genome binned from sequencing reads available in SRX823159 metagenome
assembly_method	CLC de novo assembler
assembly_method_version	4.4.1
completeness_estimated	98.21%
contamination_estimated	0.99%
environmental_sample	true
genome_coverage	48.16
mapping_method	BWA (BWA-MEM)
mapping_method_version	0.7.12-r1039
metagenomic	true
quality_assessment_method	CheckM
quality_assessment_method_version	1.0.6
value	This BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1749776.

Description: Uncultivated genome recovered from an assembly of the SRX823159 metagenome.

BioProject: PRJNA348753 metagenomes
Retrieve all samples from this project

Submission: University of Queensland, Donovan Parks; 2017-02-27

Accession:: SAMN06454434
ID:: 6454434

BioProject SRA Nucleotide

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Uncultivated Klebsiella pneumoniae UBA7610 genome recovered from SRX823159
Uncultivated Klebsiella pneumoniae UBA7610 genome recovered from SRX823159

biosample
Vibrio cholerae HE-40 vcoHE40.contig.115, whole genome shotgun sequence
Vibrio cholerae HE-40 vcoHE40.contig.115, whole genome shotgun sequence
gi|423964650|ref|NZ_JH967856.1||gnl NZ_AJRX01|vcoHE40.contig.115

Nucleotide
Taxonomy Links for Protein (Select 2293626541) (1)
Taxonomy
BioProject Links for Protein (Select 1867163731) (2)
BioProject
Protein Links for Conserved Domains (Select 461826) (7907)
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