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Microbe sample from Candidatus Omnitrophota bacterium

Identifiers
BioSample: SAMN09638402; Sample name: Uncultivated Candidatus Omnitrophica bacterium HyVt-226 genome recovered from SRR5214304; SRA: SRS3740397
Organism
Candidatus Omnitrophota bacterium
cellular organisms; Bacteria; PVC group; Candidatus Omnitrophota; unclassified Candidatus Omnitrophota
Package
Microbe; version 1.0
Attributes
isolateHyVt-226
isolation sourcemarine hydrothermal sediment
collection date2009-12-02
geographic locationMexico: Guaymas Basin, Gulf of California
sample typemetagenomic assembly
latitude and longitude27.0078 N 111.4071 W
subsource noteMetagenome-assembled genome binned from sequencing reads available in SRR5214304
metagenome sourcemarine metagenome
assembly_method_and_versionDOE-JGI IMG deposited assembly (IMG Genome ID: 3300010332)
completeness_estimated50.76
contamination_estimated4.64
quality_assessment_method_and_versionCheckM v1.0.7
environmental-sampletrue
genome_coverage8
mapping_method_and_versionBowtie 2 v2.2.8
metagenomictrue
BioProject
PRJNA480137 metagenomes
Retrieve all samples from this project

Submission
The University of Hong Kong, Zhichao Zhou; 2018-07-11
Accession:
SAMN09638402
ID:
9638402

BioProject SRA Nucleotide

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