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Microbe sample from Gammaproteobacteria bacterium

Identifiers
BioSample: SAMN09638577; Sample name: Uncultivated Gammaproteobacteria bacterium HyVt-384 genome recovered from SRR3136141; SRA: SRS3740360
Organism
Gammaproteobacteria bacterium
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; unclassified Gammaproteobacteria
Package
Microbe; version 1.0
Attributes
isolateHyVt-384
isolation sourcedeep-sea hydrothermal vent sediment
collection date2013-12-20
geographic locationIndian Ocean
sample typemetagenomic assembly
latitude and longitude27.85 S 63.94000000 E
subsource noteMetagenome-assembled genome binned from sequencing reads available in SRR3136141
metagenome sourcemarine sediment metagenome
assembly_method_and_versionMEGAHIT v1.1.2
completeness_estimated48.28
contamination_estimated3.45
quality_assessment_method_and_versionCheckM v1.0.7
environmental-sampletrue
genome_coverage0.44
mapping_method_and_versionBowtie 2 v2.2.8
metagenomictrue
BioProject
PRJNA480137 metagenomes
Retrieve all samples from this project

Submission
The University of Hong Kong, Zhichao Zhou; 2018-07-11
Accession:
SAMN09638577
ID:
9638577

BioProject SRA Nucleotide

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