Microbe sample from Gammaproteobacteria bacterium - BioSample - NCBI

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Microbe sample from Gammaproteobacteria bacterium

Identifiers: BioSample: SAMN09638615; Sample name: Uncultivated Gammaproteobacteria bacterium HyVt-418 genome recovered from SRR4028170; SRA: SRS3740507

Organism: Gammaproteobacteria bacterium
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; unclassified Gammaproteobacteria

Package: Microbe; version 1.0

Attributes

isolate	HyVt-418
isolation source	Hydrothermal vent sediment
collection date	2012-08
geographic location	Atlantic Ocean
sample type	metagenomic assembly
latitude and longitude	15.16 S 13.35000000 W
subsource note	Metagenome-assembled genome binned from sequencing reads available in SRR4028170
metagenome source	marine sediment metagenome
assembly_method_and_version	MEGAHIT v1.1.2
completeness_estimated	81.11
contamination_estimated	2.21
quality_assessment_method_and_version	CheckM v1.0.7
environmental-sample	true
genome_coverage	13.59
mapping_method_and_version	Bowtie 2 v2.2.8
metagenomic	true

BioProject: PRJNA480137 metagenomes
Retrieve all samples from this project

Submission: The University of Hong Kong, Zhichao Zhou; 2018-07-11

Accession:: SAMN09638615
ID:: 9638615

BioProject SRA Nucleotide

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Microbe sample from Gammaproteobacteria bacterium
Microbe sample from Gammaproteobacteria bacterium

biosample
RecName: Full=Protein RPN4; AltName: Full=Nuclear protein SON1; AltName: Full=Ub...
RecName: Full=Protein RPN4; AltName: Full=Nuclear protein SON1; AltName: Full=Ubiquitin fusion degradation protein 5
gi|417794|sp|Q03465.1|RPN4_YEAST

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