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Microbe sample from Campylobacterota bacterium

Identifiers
BioSample: SAMN09638786; Sample name: Uncultivated Epsilonproteobacteria bacterium HyVt-572 genome recovered from SRR4453772; SRA: SRS3740465
Organism
Campylobacterota bacterium
cellular organisms; Bacteria; Campylobacterota; unclassified Campylobacterota
Package
Microbe; version 1.0
Attributes
isolateHyVt-572
isolation sourcerock sample from hydrothermal vent
collection date2005-05-21
geographic locationTonga: Lau Basin
sample typemetagenomic assembly
latitude and longitude21.9892 S 176.5677 W
subsource noteMetagenome-assembled genome binned from sequencing reads available in SRR4453772
metagenome sourcehydrothermal vent metagenome
assembly_method_and_versionMEGAHIT v1.1.2
completeness_estimated86.76
contamination_estimated5.27
quality_assessment_method_and_versionCheckM v1.0.7
environmental-sampletrue
genome_coverage18.64
mapping_method_and_versionBowtie 2 v2.2.8
metagenomictrue
BioProject
PRJNA480137 metagenomes
Retrieve all samples from this project

Submission
The University of Hong Kong, Zhichao Zhou; 2018-07-11
Accession:
SAMN09638786
ID:
9638786

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