Microbe sample from Gammaproteobacteria bacterium - BioSample - NCBI

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Microbe sample from Gammaproteobacteria bacterium

Identifiers: BioSample: SAMN09926264; Sample name: Uncultivated Gammaproteobacteria bacterium SZUA-1025 genome recovered from SRR3577362; SRA: SRS3745205

Organism: Gammaproteobacteria bacterium
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; unclassified Gammaproteobacteria

Package: Microbe; version 1.0

Attributes

isolate	SZUA-1025
isolation source	Guaymas Basin Hydrothermal plume metagenome
collection date	2004-07-11
geographic location	USA:Guaymas Basin
sample type	metagenomic assembly
latitude and longitude	27.51583333 N 111.425 W
derived from	This BioSample is a metagenomic assembly obtained from the publicly available reads deposited in SRA accessions: SRR3577362
metagenome source	hydrothermal vent metagenome
assembly_method_and_version	MEGAHIT v1.1.2
completeness_estimated	57.84
contamination_estimated	3.43
quality_assessment_method_and_version	CheckM v1.0.7
environmental-sample	true
genome_coverage	13.86
mapping_method_and_version	Bowtie 2 v2.2.8
metagenomic	true

BioProject: PRJNA488180 hydrothermal vent metagenome
Retrieve all samples from this project

Submission: The University of Hong Kong, Zhichao Zhou; 2018-08-28

Accession:: SAMN09926264
ID:: 9926264

BioProject SRA Nucleotide

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