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Microbe sample from Candidatus Manganitrophaceae bacterium

Identifiers
BioSample: SAMN09926282; Sample name: Uncultivated Nitrospiria bacterium SZUA-1046 genome recovered from SRR3577362; SRA: SRS3745348
Organism
Candidatus Manganitrophaceae bacterium
cellular organisms; Bacteria; Nitrospirota; Nitrospiria; Candidatus Troglogloeales; Candidatus Manganitrophaceae; unclassified Candidatus Manganitrophaceae
Package
Microbe; version 1.0
Attributes
isolateSZUA-1046
isolation sourceGuaymas Basin Hydrothermal plume metagenome
collection date2004-07-11
geographic locationUSA:Guaymas Basin
sample typemetagenomic assembly
latitude and longitude27.51583333 N 111.425 W
derived fromThis BioSample is a metagenomic assembly obtained from the publicly available reads deposited in SRA accessions: SRR3577362
metagenome sourcehydrothermal vent metagenome
assembly_method_and_versionMEGAHIT v1.1.2
completeness_estimated96.76
contamination_estimated0.91
quality_assessment_method_and_versionCheckM v1.0.7
environmental-sampletrue
genome_coverage19.81
mapping_method_and_versionBowtie 2 v2.2.8
metagenomictrue
BioProject
PRJNA488180 hydrothermal vent metagenome
Retrieve all samples from this project

Submission
The University of Hong Kong, Zhichao Zhou; 2018-08-28
Accession:
SAMN09926282
ID:
9926282

BioProject SRA Nucleotide

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