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Microbe sample from Rhodospirillales bacterium

Identifiers
BioSample: SAMN09926295; Sample name: Uncultivated Rhodospirillales bacterium SZUA-1064 genome recovered from SRR3577362; SRA: SRS3745377
Organism
Rhodospirillales bacterium
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria; Rhodospirillales; unclassified Rhodospirillales
Package
Microbe; version 1.0
Attributes
isolateSZUA-1064
isolation sourceGuaymas Basin Hydrothermal plume metagenome
collection date2004-07-11
geographic locationUSA:Guaymas Basin
sample typemetagenomic assembly
latitude and longitude27.51583333 N 111.425 W
derived fromThis BioSample is a metagenomic assembly obtained from the publicly available reads deposited in SRA accessions: SRR3577362
metagenome sourcehydrothermal vent metagenome
assembly_method_and_versionMEGAHIT v1.1.2
completeness_estimated91.87
contamination_estimated7.63
quality_assessment_method_and_versionCheckM v1.0.7
environmental-sampletrue
genome_coverage10.64
mapping_method_and_versionBowtie 2 v2.2.8
metagenomictrue
BioProject
PRJNA488180 hydrothermal vent metagenome
Retrieve all samples from this project

Submission
The University of Hong Kong, Zhichao Zhou; 2018-08-28
Accession:
SAMN09926295
ID:
9926295

BioProject SRA Nucleotide

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