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Microbe sample from Acidimicrobiia bacterium

Identifiers
BioSample: SAMN09926342; Sample name: Uncultivated Acidimicrobiia bacterium SZUA-1145 genome recovered from SRR2046235 SRR2046236 SRR2046222; SRA: SRS3745392
Organism
Acidimicrobiia bacterium
cellular organisms; Bacteria; Bacillati; Actinomycetota; Acidimicrobiia; unclassified Acidimicrobiia
Package
Microbe; version 1.0
Attributes
isolateSZUA-1145
isolation sourceDilute Hydrothermal Plume
collection date2012-01-18
geographic locationAtlantic Ocean:Mid Cayman Rise
sample typemetagenomic assembly
latitude and longitude18.37636666 N 81.79808333 W
derived fromThis BioSample is a metagenomic assembly obtained from the publicly available reads deposited in SRA accessions: SRR2046235 SRR2046236 SRR2046222
metagenome sourcehydrothermal vent metagenome
assembly_method_and_versionMEGAHIT v1.1.2
completeness_estimated91.45
contamination_estimated2.99
quality_assessment_method_and_versionCheckM v1.0.7
environmental-sampletrue
genome_coverage19.26
mapping_method_and_versionBowtie 2 v2.2.8
metagenomictrue
BioProject
PRJNA488180 hydrothermal vent metagenome
Retrieve all samples from this project

Submission
The University of Hong Kong, Zhichao Zhou; 2018-08-28
Accession:
SAMN09926342
ID:
9926342

BioProject SRA Nucleotide

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