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Microbe sample from Dehalococcoidia bacterium

Identifiers
BioSample: SAMN09926361; Sample name: Uncultivated Dehalococcoidia bacterium SZUA-1172 genome recovered from SRR2046238 SRR2046237 SRR2046221; SRA: SRS3745480
Organism
Dehalococcoidia bacterium
cellular organisms; Bacteria; Bacillati; Chloroflexota; Dehalococcoidia; unclassified Dehalococcoidia
Package
Microbe; version 1.0
Attributes
isolateSZUA-1172
isolation sourceHydrothermal Plume
collection date2012-01-21
geographic locationAtlantic Ocean:Mid Cayman Rise
sample typemetagenomic assembly
latitude and longitude18.54650166 N 81.71823333 W
derived fromThis BioSample is a metagenomic assembly obtained from the publicly available reads deposited in SRA accessions: SRR2046238 SRR2046237 SRR2046221
metagenome sourcehydrothermal vent metagenome
assembly_method_and_versionMEGAHIT v1.1.2
completeness_estimated54.24
contamination_estimated1.98
quality_assessment_method_and_versionCheckM v1.0.7
environmental-sampletrue
genome_coverage18.08
mapping_method_and_versionBowtie 2 v2.2.8
metagenomictrue
BioProject
PRJNA488180 hydrothermal vent metagenome
Retrieve all samples from this project

Submission
The University of Hong Kong, Zhichao Zhou; 2018-08-28
Accession:
SAMN09926361
ID:
9926361

BioProject SRA Nucleotide

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