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Microbe sample from Flavobacteriaceae bacterium

Identifiers
BioSample: SAMN09926403; Sample name: Uncultivated Flavobacteriaceae bacterium SZUA-1246 genome recovered from SRR1217461 SRR1217465; SRA: SRS3745429
Organism
Flavobacteriaceae bacterium
cellular organisms; Bacteria; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; unclassified Flavobacteriaceae
Package
Microbe; version 1.0
Attributes
isolateSZUA-1246
isolation sourceTahi Moana Above plume background
collection date2009-06-29
geographic locationPacific Ocean:Lau Basin
sample typemetagenomic assembly
latitude and longitude20.68213071 S 176.18336343 W
derived fromThis BioSample is a metagenomic assembly obtained from the publicly available reads deposited in SRA accessions: SRR1217461 SRR1217465
metagenome sourcehydrothermal vent metagenome
assembly_method_and_versionMEGAHIT v1.1.2
completeness_estimated95.82
contamination_estimated0
quality_assessment_method_and_versionCheckM v1.0.7
environmental-sampletrue
genome_coverage317.65
mapping_method_and_versionBowtie 2 v2.2.8
metagenomictrue
BioProject
PRJNA488180 hydrothermal vent metagenome
Retrieve all samples from this project

Submission
The University of Hong Kong, Zhichao Zhou; 2018-08-28
Accession:
SAMN09926403
ID:
9926403

BioProject SRA Nucleotide

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