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Microbe sample from Chromatiales bacterium

Identifiers
BioSample: SAMN09926411; Sample name: Uncultivated Chromatiales bacterium SZUA-1263 genome recovered from SRR1217461 SRR1217465; SRA: SRS3745396
Organism
Chromatiales bacterium
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Chromatiales; unclassified Chromatiales
Package
Microbe; version 1.0
Attributes
isolateSZUA-1263
isolation sourceTahi Moana Above plume background
collection date2009-06-29
geographic locationPacific Ocean:Lau Basin
sample typemetagenomic assembly
latitude and longitude20.68213071 S 176.18336343 W
derived fromThis BioSample is a metagenomic assembly obtained from the publicly available reads deposited in SRA accessions: SRR1217461 SRR1217465
metagenome sourcehydrothermal vent metagenome
assembly_method_and_versionMEGAHIT v1.1.2
completeness_estimated69.3
contamination_estimated1.38
quality_assessment_method_and_versionCheckM v1.0.7
environmental-sampletrue
genome_coverage14.84
mapping_method_and_versionBowtie 2 v2.2.8
metagenomictrue
BioProject
PRJNA488180 hydrothermal vent metagenome
Retrieve all samples from this project

Submission
The University of Hong Kong, Zhichao Zhou; 2018-08-28
Accession:
SAMN09926411
ID:
9926411

BioProject SRA Nucleotide

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