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Microbe sample from Mariprofundaceae bacterium

Identifiers
BioSample: SAMN09926452; Sample name: Uncultivated Mariprofundaceae bacterium SZUA-1372 genome recovered from ERS1370020; SRA: SRS3745241
Organism
Mariprofundaceae bacterium
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Zetaproteobacteria; Mariprofundales; Mariprofundaceae; unclassified Mariprofundaceae
Package
Microbe; version 1.0
Attributes
isolateSZUA-1372
isolation sourceMid-Cayman Rise Vent Fluids
collection date2017-04-15
geographic locationAtlantic Ocean:Mid Cayman Rise
sample typemetagenomic assembly
latitude and longitude18.5466 N 81.7182 W
derived fromThis BioSample is a metagenomic assembly obtained from the publicly available reads deposited in SRA accessions: ERS1370020
metagenome sourcehydrothermal vent metagenome
assembly_method_and_versionMEGAHIT v1.1.2
completeness_estimated96.36
contamination_estimated2.2
quality_assessment_method_and_versionCheckM v1.0.7
environmental-sampletrue
genome_coverage25.92
mapping_method_and_versionBowtie 2 v2.2.8
metagenomictrue
BioProject
PRJNA488180 hydrothermal vent metagenome
Retrieve all samples from this project

Submission
The University of Hong Kong, Zhichao Zhou; 2018-08-28
Accession:
SAMN09926452
ID:
9926452

BioProject SRA Nucleotide

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