U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Microbe sample from Candidatus Paceibacterota bacterium

Identifiers
BioSample: SAMN09926458; Sample name: Uncultivated Candidatus Pacebacteria bacterium SZUA-1380 genome recovered from ERS1370020; SRA: SRS3745274
Organism
Candidatus Paceibacterota bacterium
cellular organisms; Bacteria; Bacteria incertae sedis; Bacteria candidate phyla; Patescibacteria group; Microgenomates group; Candidatus Paceibacterota; unclassified Candidatus Paceibacterota
Package
Microbe; version 1.0
Attributes
isolateSZUA-1380
isolation sourceMid-Cayman Rise Vent Fluids
collection date2017-04-15
geographic locationAtlantic Ocean:Mid Cayman Rise
sample typemetagenomic assembly
latitude and longitude18.5466 N 81.7182 W
derived fromThis BioSample is a metagenomic assembly obtained from the publicly available reads deposited in SRA accessions: ERS1370020
metagenome sourcehydrothermal vent metagenome
assembly_method_and_versionMEGAHIT v1.1.2
completeness_estimated54.07
contamination_estimated2.25
quality_assessment_method_and_versionCheckM v1.0.7
environmental-sampletrue
genome_coverage33.85
mapping_method_and_versionBowtie 2 v2.2.8
metagenomictrue
BioProject
PRJNA488180 hydrothermal vent metagenome
Retrieve all samples from this project

Submission
The University of Hong Kong, Zhichao Zhou; 2018-08-28
Accession:
SAMN09926458
ID:
9926458

BioProject SRA Nucleotide

Supplemental Content

Related information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
You are here: NCBI > DNA & RNA > BioSample
Support Center