U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Microbe sample from Bacteroidia bacterium

Identifiers
BioSample: SAMN09926475; Sample name: Uncultivated Bacteroidia bacterium SZUA-1411 genome recovered from ERS1370021; SRA: SRS3745422
Organism
Bacteroidia bacterium
cellular organisms; Bacteria; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Bacteroidia; unclassified Bacteroidia
Package
Microbe; version 1.0
Attributes
isolateSZUA-1411
isolation sourceMid-Cayman Rise Vent Fluids
collection date2017-04-15
geographic locationAtlantic Ocean:Mid Cayman Rise
sample typemetagenomic assembly
latitude and longitude18.5466 N 81.7177 W
derived fromThis BioSample is a metagenomic assembly obtained from the publicly available reads deposited in SRA accessions: ERS1370021
metagenome sourcehydrothermal vent metagenome
assembly_method_and_versionMEGAHIT v1.1.2
completeness_estimated56.88
contamination_estimated2.92
quality_assessment_method_and_versionCheckM v1.0.7
environmental-sampletrue
genome_coverage14.28
mapping_method_and_versionBowtie 2 v2.2.8
metagenomictrue
BioProject
PRJNA488180 hydrothermal vent metagenome
Retrieve all samples from this project

Submission
The University of Hong Kong, Zhichao Zhou; 2018-08-28
Accession:
SAMN09926475
ID:
9926475

BioProject SRA Nucleotide

Supplemental Content

Related information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
You are here: NCBI > DNA & RNA > BioSample
Support Center