Microbe sample from Caldilineales bacterium - BioSample - NCBI

Warning: The NCBI web site requires JavaScript to function. more...

Result Filters

Microbe sample from Caldilineales bacterium

Identifiers: BioSample: SAMN09926515; Sample name: Uncultivated Caldilineales bacterium SZUA-1491 genome recovered from ERS1370023; SRA: SRS3745337

Organism: Caldilineales bacterium
cellular organisms; Bacteria; Bacillati; Chloroflexota; Caldilineae; Caldilineales; unclassified Caldilineales

Package: Microbe; version 1.0

Attributes

isolate	SZUA-1491
isolation source	Mid-Cayman Rise Vent Fluids
collection date	2017-04-15
geographic location	Atlantic Ocean:Mid Cayman Rise
sample type	metagenomic assembly
latitude and longitude	18.3747 N 81.7973 W
derived from	This BioSample is a metagenomic assembly obtained from the publicly available reads deposited in SRA accessions: ERS1370023
metagenome source	hydrothermal vent metagenome
assembly_method_and_version	MEGAHIT v1.1.2
completeness_estimated	55.65
contamination_estimated	0.99
quality_assessment_method_and_version	CheckM v1.0.7
environmental-sample	true
genome_coverage	56.16
mapping_method_and_version	Bowtie 2 v2.2.8
metagenomic	true

BioProject: PRJNA488180 hydrothermal vent metagenome
Retrieve all samples from this project

Submission: The University of Hong Kong, Zhichao Zhou; 2018-08-28

Accession:: SAMN09926515
ID:: 9926515

BioProject SRA Nucleotide

Supplemental Content

Related information

BioProject
BioProject links
SRA
Links to SRA experiments
Nucleotide
Nucleotide links
Assembly
Assembly
Taxonomy
Links to Taxonomy

Recent activity

Clear Turn Off Turn On

Microbe sample from Caldilineales bacterium
Microbe sample from Caldilineales bacterium

biosample
Microbe sample from Cycloclasticus sp.
Microbe sample from Cycloclasticus sp.

biosample
Microbe sample from Nitrospirales bacterium
Microbe sample from Nitrospirales bacterium

biosample
Microbe sample from Psychromonas hadalis
Microbe sample from Psychromonas hadalis

biosample
Microbe sample from Rhodothermales bacterium
Microbe sample from Rhodothermales bacterium

biosample

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

You are here: NCBI > DNA & RNA > BioSample