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Microbe sample from Sulfurivirga caldicuralii

Identifiers
BioSample: SAMN09926532; Sample name: Uncultivated Sulfurivirga caldicuralii SZUA-1517 genome recovered from ERS1370027; SRA: SRS3745263
Organism
Sulfurivirga caldicuralii
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Sulfurivirga
Package
Microbe; version 1.0
Attributes
isolateSZUA-1517
isolation sourceMid-Cayman Rise Vent Fluids
collection date2017-04-15
geographic locationAtlantic Ocean:Mid Cayman Rise
sample typemetagenomic assembly
latitude and longitude18.375 N 81.7976 W
derived fromThis BioSample is a metagenomic assembly obtained from the publicly available reads deposited in SRA accessions: ERS1370027
metagenome sourcehydrothermal vent metagenome
assembly_method_and_versionMEGAHIT v1.1.2
completeness_estimated96.85
contamination_estimated1.02
quality_assessment_method_and_versionCheckM v1.0.7
environmental-sampletrue
genome_coverage41.82
mapping_method_and_versionBowtie 2 v2.2.8
metagenomictrue
BioProject
PRJNA488180 hydrothermal vent metagenome
Retrieve all samples from this project

Submission
The University of Hong Kong, Zhichao Zhou; 2018-08-28
Accession:
SAMN09926532
ID:
9926532

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