MIGS Cultured Bacterial/Archaeal sample from Lepag... - BioSample

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Identifiers: BioSample: SAMN10878287; Sample name: Bacteroidales fam. nov. isolate NM04_E33; SRA: SRS4664507

Organism: Lepagella muris
cellular organisms; Bacteria; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Bacteroidia; Bacteroidales; Muribaculaceae; Lepagella

Attributes

strain	NM04_E33
collection date	2016
broad-scale environmental context	Not applicable
local-scale environmental context	Not applicable
environmental medium	Not applicable
geographic location	Canada: Toronto
host	Mus musculus
isolation and growth condition	not applicable
latitude and longitude	not applicable
number of replicons	not applicable
reference for biomaterial	missing
estimated size	4832315
extrachromosomal elements	Missing
host age	9 weeks
host body habitat	colon and cecum
host disease	colon cancer, Lynch syndrome
host genotype	C57BL/6 APCmin/+ Msh2-/-
host phenotype	colitis and polyposis
host taxonomy ID	10090 (10090)
isolation source	gut
relationship to oxygen	anaerobe
sample material processing	Disecct cecum and colon in anaerobic chamber. Homogenize, dilute, plate on agar.
temperature	37
type-material	type strain of Lepagella muris

MIGS Cultured Bacterial/Archaeal sample from Lepagella muris
MIGS Cultured Bacterial/Archaeal sample from Lepagella muris

biosample
Parvibacter caecicola strain NM48_B13, whole genome shotgun sequencing project
Parvibacter caecicola strain NM48_B13, whole genome shotgun sequencing project
gi|1631300536|gb|SSTM00000000.1|SST 0000

Nucleotide
Clostridium perfringens strain NM49_B9-7, whole genome shotgun sequencing projec...
Clostridium perfringens strain NM49_B9-7, whole genome shotgun sequencing project
gi|1615443963|gb|SRYQ00000000.1|SRY 0000

Nucleotide
Staphylococcus epidermidis strain ATCC 14990 plasmid pATCC14990-2, complete sequ...
Staphylococcus epidermidis strain ATCC 14990 plasmid pATCC14990-2, complete sequence, whole genome shotgun sequence
gi|1178178765|gb|CM007846.1||gnl|WG C|contig_23

Nucleotide

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