U_72458

Warning: The NCBI web site requires JavaScript to function. more...

Result Filters

Identifiers: BioSample: SAMN13192961; Sample name: UBA10516 genome recovered from SRX559915; SRA: SRS5771349

Organism: Methanoregulaceae archaeon
cellular organisms; Archaea; Methanobacteriati; Methanobacteriota; Stenosarchaea group; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; unclassified Methanoregulaceae

Attributes

isolate	UBA10516
collection date	not available
broad-scale environmental context	tailings pond
local-scale environmental context	Pond
environmental medium	waste water
geographic location	Canada: North Alberta
isolation source	hydrocarbon
latitude and longitude	57.02 N 111.55 W
derived from	This BioSample is a metagenomic assembly obtained from the publicly available reads deposited in SRA accessions: SRR1313281,SRR1313282,SRR1313285,SRR1313283,SRR1313287,SRR1313284
metagenome source	hydrocarbon metagenome
assembly_method	CLC de novo assembler
assembly_method_version	4.4.1
completeness_estimated	0.8676
contamination_estimated	0.0131
environmental_sample	True
mapping_method_version	BWA (BWA-MEM)
mapping_method	0.7.12-r1039
metagenomic	True
quality_assessment_method	CheckM
quality_assessment_method_version	1.0.6