U_73386

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Result Filters

Identifiers: BioSample: SAMN13192968; Sample name: UBA10923 genome recovered from SRX691264; SRA: SRS5771356

Organism: Methanosarcina sp.
cellular organisms; Archaea; Methanobacteriati; Methanobacteriota; Stenosarchaea group; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina; unclassified Methanosarcina

Attributes

isolate	UBA10923
collection date	2013-04-21
broad-scale environmental context	anthropogenic terrestrial biome
local-scale environmental context	soil
environmental medium	mud
geographic location	China: Luzhou
isolation source	fermentation
latitude and longitude	28.88 N 105.45 E
derived from	This BioSample is a metagenomic assembly obtained from the publicly available reads deposited in SRA accessions: SRR1561989
metagenome source	fermentation metagenome
assembly_method	CLC de novo assembler
assembly_method_version	4.4.1
completeness_estimated	0.559
contamination_estimated	0.0047
environmental_sample	True
mapping_method_version	BWA (BWA-MEM)
mapping_method	0.7.12-r1039
metagenomic	True
quality_assessment_method	CheckM
quality_assessment_method_version	1.0.6

Description

Uncultivated genome recovered from an assembly of the SRX691264 metagenome.

Keywords: GSC:MIxS;MIMAG:6.0

U_73386
U_73386

biosample
MAG TPA_asm: Methermicoccus shengliensis isolate UBA12518, whole genome shotgun ...
MAG TPA_asm: Methermicoccus shengliensis isolate UBA12518, whole genome shotgun sequencing project
gi|1851982470|tpg|DUIH00000000.1|DU 00000

Nucleotide
MAG TPA_asm: Candidatus Thalassarchaeaceae archaeon isolate UBA8209, whole genom...
MAG TPA_asm: Candidatus Thalassarchaeaceae archaeon isolate UBA8209, whole genome shotgun sequencing project
gi|1851982482|tpg|DUIR00000000.1|DU 00000

Nucleotide
MAG TPA_asm: Methanosphaera sp. isolate UBA11921, whole genome shotgun sequencin...
MAG TPA_asm: Methanosphaera sp. isolate UBA11921, whole genome shotgun sequencing project
gi|1851983400|tpg|DUHK00000000.1|DU 00000

Nucleotide

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