U_76011

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Result Filters

Identifiers: BioSample: SAMN13192980; Sample name: UBA11802 genome recovered from SRX545991; SRA: SRS5771370

Organism: Methanobacterium subterraneum
cellular organisms; Archaea; Euryarchaeota; Methanomada group; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium

Attributes

isolate	UBA11802
collection date	2012-04-17
broad-scale environmental context	produced water sample
local-scale environmental context	not available
environmental medium	not available
geographic location	Canada: Medicine Hat, Alberta
isolation source	hydrocarbon
latitude and longitude	57.02 N 111.55 W
derived from	This BioSample is a metagenomic assembly obtained from the publicly available reads deposited in SRA accessions: SRR1290767,SRR1290771,SRR1290769,SRR1290772,SRR1290774,SRR1290764
metagenome source	hydrocarbon metagenome
assembly_method	CLC de novo assembler
assembly_method_version	4.4.1
completeness_estimated	0.6862
contamination_estimated	0.024
environmental_sample	True
mapping_method_version	BWA (BWA-MEM)
mapping_method	0.7.12-r1039
metagenomic	True
quality_assessment_method	CheckM
quality_assessment_method_version	1.0.6