U_68196

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Result Filters

Identifiers: BioSample: SAMN13193052; Sample name: UBA8928 genome recovered from SRX559894; SRA: SRS5771298

Organism: Methanoculleus sp.
cellular organisms; Archaea; Methanobacteriati; Methanobacteriota; Stenosarchaea group; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoculleus; unclassified Methanoculleus

Attributes

isolate	UBA8928
collection date	not available
broad-scale environmental context	tailings pond
local-scale environmental context	enrichment culture
environmental medium	waste water
geographic location	Canada:Athabasca Oil Sands
isolation source	hydrocarbon
latitude and longitude	57.02 N 111.65 W
derived from	This BioSample is a metagenomic assembly obtained from the publicly available reads deposited in SRA accessions: SRR1313242,SRR1313243
metagenome source	hydrocarbon metagenome
assembly_method	CLC de novo assembler
assembly_method_version	4.4.1
completeness_estimated	0.5918
contamination_estimated	0.0065
environmental_sample	True
mapping_method_version	BWA (BWA-MEM)
mapping_method	0.7.12-r1039
metagenomic	True
quality_assessment_method	CheckM
quality_assessment_method_version	1.0.6

Description

Uncultivated genome recovered from an assembly of the SRX559894 metagenome.

Keywords: GSC:MIxS;MIMAG:6.0

U_68196
U_68196

biosample
U_67580
U_67580

biosample
MAG TPA_asm: Candidatus Thalassarchaeaceae archaeon isolate UBA8894, whole genom...
MAG TPA_asm: Candidatus Thalassarchaeaceae archaeon isolate UBA8894, whole genome shotgun sequencing project
gi|1851982478|tpg|DUJW00000000.1|DU 00000

Nucleotide
MAG TPA_asm: Thermococcaceae archaeon isolate UBA12528, whole genome shotgun seq...
MAG TPA_asm: Thermococcaceae archaeon isolate UBA12528, whole genome shotgun sequencing project
gi|1851983417|tpg|DUIK00000000.1|DU 00000

Nucleotide
MAG TPA_asm: Nitrosopumilus sp. isolate UBA9319, whole genome shotgun sequencing...
MAG TPA_asm: Nitrosopumilus sp. isolate UBA9319, whole genome shotgun sequencing project
gi|1851982496|tpg|DUKI00000000.1|DU 00000

Nucleotide

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