U_69456

Warning: The NCBI web site requires JavaScript to function. more...

Result Filters

Identifiers: BioSample: SAMN13193058; Sample name: UBA9293 genome recovered from SRX559946; SRA: SRS5771304

Organism: Thermoplasmata archaeon
cellular organisms; Archaea; Candidatus Thermoplasmatota; Thermoplasmata; unclassified Thermoplasmata

Attributes

isolate	UBA9293
collection date	not available
broad-scale environmental context	Marine
local-scale environmental context	Water
environmental medium	Oil polluted marine water
geographic location	USA: Coal Oil Point, Santa Barbara, California
isolation source	marine
latitude and longitude	34.39225 N 119.845662 W
derived from	This BioSample is a metagenomic assembly obtained from the publicly available reads deposited in SRA accessions: SRR1313318
metagenome source	marine metagenome
assembly_method	CLC de novo assembler
assembly_method_version	4.4.1
completeness_estimated	0.7627
contamination_estimated	0.036
environmental_sample	True
mapping_method_version	BWA (BWA-MEM)
mapping_method	0.7.12-r1039
metagenomic	True
quality_assessment_method	CheckM
quality_assessment_method_version	1.0.6

Description

Uncultivated genome recovered from an assembly of the SRX559946 metagenome.

Keywords: GSC:MIxS;MIMAG:6.0

U_69456
U_69456

biosample
U_66913
U_66913

biosample
U_69589
U_69589

biosample
MAG TPA_asm: Nitrosopumilus sp. isolate UBA9278, whole genome shotgun sequencing...
MAG TPA_asm: Nitrosopumilus sp. isolate UBA9278, whole genome shotgun sequencing project
gi|1851982492|tpg|DUKD00000000.1|DU 00000

Nucleotide

Your browsing activity is empty.

Activity recording is turned off.

You are here: NCBI > DNA & RNA > BioSample