U_71162

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Result Filters

Identifiers: BioSample: SAMN13193077; Sample name: UBA9950 genome recovered from SRX211001; SRA: SRS5771325

Organism: Methanofastidiosum sp.
cellular organisms; Archaea; Methanobacteriati; Methanobacteriota; Stenosarchaea group; Candidatus Methanofastidiosia; Candidatus Methanofastidiosales; Candidatus Methanofastidiosaceae; Candidatus Methanofastidiosum; unclassified Candidatus Methanofastidiosum

Attributes

isolate	UBA9950
collection date	2011-07-21
broad-scale environmental context	tailings pond
local-scale environmental context	not available
environmental medium	not available
geographic location	Canada: Syncrude tailings pond, Wood Buffalo, Alberta
isolation source	hydrocarbon
latitude and longitude	57.02 N 111.55 W
derived from	This BioSample is a metagenomic assembly obtained from the publicly available reads deposited in SRA accessions: SRR636597
metagenome source	hydrocarbon metagenome
assembly_method	CLC de novo assembler
assembly_method_version	4.4.1
completeness_estimated	0.7456
contamination_estimated	0.0396
environmental_sample	True
mapping_method_version	BWA (BWA-MEM)
mapping_method	0.7.12-r1039
metagenomic	True
quality_assessment_method	CheckM
quality_assessment_method_version	1.0.6

Description

Uncultivated genome recovered from an assembly of the SRX211001 metagenome.

Keywords: GSC:MIxS;MIMAG:6.0

U_71162
U_71162

biosample
PREDICTED: Mus musculus ADP-ribosylation factor-like 5A (Arl5a), transcript vari...
PREDICTED: Mus musculus ADP-ribosylation factor-like 5A (Arl5a), transcript variant X1, mRNA
gi|1907143728|ref|XM_011239204.4|

Nucleotide
U_73282
U_73282

biosample
MAG TPA_asm: Methanosarcina sp. isolate UBA8098, whole genome shotgun sequencing...
MAG TPA_asm: Methanosarcina sp. isolate UBA8098, whole genome shotgun sequencing project
gi|1851982474|tpg|DUIO00000000.1|DU 00000

Nucleotide
MAG TPA_asm: Poseidonia sp. isolate UBA8339, whole genome shotgun sequencing pro...
MAG TPA_asm: Poseidonia sp. isolate UBA8339, whole genome shotgun sequencing project
gi|1851982515|tpg|DUIU00000000.1|DU 00000

Nucleotide

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