Pathogen: environmental/food/other sample from Cam... - BioSample - NCBI

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Pathogen: environmental/food/other sample from Campylobacter jejuni

Identifiers: BioSample: SAMN15377984; SRA: SRS6967919; CFSAN: CFSAN103016

Organism: Campylobacter jejuni
cellular organisms; Bacteria; Campylobacterota; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter

Package: Pathogen: environmental/food/other; version 1.0

Attributes

Interagency Food Safety Analytics Collaboration (IFSAC) category	chicken
source type	food
strain	19CA08CB04-C1
collection date	2019-08
geographic location	USA:CA
isolate name alias	CFSAN103016
collected by	Contra Costa Public Health Laboratory
latitude and longitude	missing
isolation source	chicken breast
NARMS isolate number	19CA08CB04-C1
project name	GenomeTrakr
sequenced by	Contra Costa Public Health Laboratory
PublicAccession	CFSAN103016
attribute_package	environmental/food/other
Genus	Campylobacter
Species	jejuni
ontological term	chicken breast:FOODON_00002703

BioProject: PRJNA292664 FDA NARMS Campylobacter
Retrieve all samples from this project

Submission: CFSAN; 2020-06-26

Antibiogram
Antibiotic	Resistance phenotype	Measurement sign	Measurement	Measurement units	Laboratory typing method	Laboratory typing platform	Vendor	Laboratory typing method version or reagent	Testing standard
azithromycin	susceptible	==	0.03	mg/L	MIC	Sensititre	Trek		EUCAST
ciprofloxacin	resistant	==	16	mg/L	MIC	Sensititre	Trek		EUCAST
clindamycin	susceptible	==	0.25	mg/L	MIC	Sensititre	Trek		EUCAST
erythromycin	susceptible	==	0.25	mg/L	MIC	Sensititre	Trek		EUCAST
florfenicol	susceptible	==	1	mg/L	MIC	Sensititre	Trek		EUCAST
gentamicin	susceptible	==	0.5	mg/L	MIC	Sensititre	Trek		EUCAST
nalidixic acid	resistant	>	64	mg/L	MIC	Sensititre	Trek		EUCAST
tetracycline	susceptible	==	0.25	mg/L	MIC	Sensititre	Trek		EUCAST

Accession:: SAMN15377984
ID:: 15377984

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