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Ruminococcus MAG, UW_MP_ACUT3_1

Identifiers
BioSample: SAMN22412090; Sample name: UW_MP_ACUT3_1
Organism
Ruminococcus sp.
cellular organisms; Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales; Oscillospiraceae; Ruminococcus; unclassified Ruminococcus
Package
MIMAG: metagenome-assembled genome; version 6.0
Attributes
collection date2018-11-21
geographic locationUSA: Madison, WI
latitude and longitude43.033933 N 89.356452 W
isolation sourceanaerobic bioreactor effluent
isolateUW_MP_ACUT3_1
broad-scale environmental contextbioreactor [ENVO:00002123]
local-scale environmental contextanaerobic bioreactor [ENVO:00002124]
environmental mediumbiological waste material [ENVO:01000373]
altitude268 m
ammonium201 milligram per liter
dissolved oxygen0 micromole per kilogram
pH5.5
phosphate195.11 milligram per liter
reference for biomaterial3300045591_33
relationship to oxygenanaerobe
sample collection device or methodSyringe
sample material processingBiomass centrifuged 10 min 10,000xg, aliquot frozen for DNA extraction
sample size2 milliliter
sample storage locationFreezer
sample storage temperature-80 degree Celcius
source material identifiersCSTR_036
temperature35 degree Celcius
sample typemetagenomic assembly
metagenome sourcebioreactor sludge metagenome
derived fromSAMN22064451
metagenomic1
environmental-sample1
Description

Improved metagenome assembled genome from a ultra-filtered-milk-permeate fermenting bioreactor. This bioreactor was operated as a continuously stirred tank reactor with a six day solids and hydraulic retention time, under anaerobic conditions and was fed ultra-filtered milk permeate, ammended with 400 mg N-NH4Cl/L. This sample was from the 36 day of operation.

Keywords: GSC:MIxS;MIMAG:6.0

BioProject
PRJNA768594 bioreactor sludge metagenome
Retrieve all samples from this project

Submission
University of Wisconsin-Madison, Kevin Myers; 2021-10-19
Accession:
SAMN22412090
ID:
22412090

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