Bifidobacterium psychraerophilum MAG, UW_MP_BIF6_4

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Result Filters

Identifiers: BioSample: SAMN22412186; Sample name: UW_MP_BIF6_4

Organism: Bifidobacterium psychraerophilum
cellular organisms; Bacteria; Bacillati; Actinomycetota; Actinomycetes; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium

Package: MIMAG: metagenome-assembled genome; version 6.0

Attributes

collection date	2019-02-01
geographic location	USA: Madison, WI
latitude and longitude	43.033933 N 89.356452 W
isolation source	anaerobic bioreactor effluent
isolate	UW_MP_BIF6_4
broad-scale environmental context	bioreactor [ENVO:00002123]
local-scale environmental context	anaerobic bioreactor [ENVO:00002124]
environmental medium	biological waste material [ENVO:01000373]
altitude	268 m
ammonium	203.27 milligram per liter
dissolved oxygen	0 micromole per kilogram
pH	5.5
phosphate	244.22 milligram per liter
reference for biomaterial	3300044548_33
relationship to oxygen	anaerobe
sample collection device or method	Syringe
sample material processing	Biomass centrifuged 10 min 10,000xg, aliquot frozen for DNA extraction
sample size	2 milliliter
sample storage location	Freezer
sample storage temperature	-80 degree Celcius
source material identifiers	CSTR_108
temperature	35 degree Celcius
sample type	metagenomic assembly
metagenome source	bioreactor sludge metagenome
derived from	SAMN22064464
metagenomic	1
environmental-sample	1

Description

Improved metagenome assembled genome from a ultra-filtered-milk-permeate fermenting bioreactor. This bioreactor was operated as a continuously stirred tank reactor with a six day solids and hydraulic retention time, under anaerobic conditions and was fed ultra-filtered milk permeate, ammended with 400 mg N-NH4Cl/L. This sample was from the 108 day of operation.

Keywords: GSC:MIxS;MIMAG:6.0