Bifidobacterium crudilactis MAG, UW_MP_BIF7_1

Warning: The NCBI web site requires JavaScript to function. more...

Result Filters

Identifiers: BioSample: SAMN22412187; Sample name: UW_MP_BIF7_1

Organism: Bifidobacterium crudilactis
cellular organisms; Bacteria; Bacillati; Actinomycetota; Actinomycetes; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium

Package: MIMAG: metagenome-assembled genome; version 6.0

Attributes

collection date	2019-10-30
geographic location	USA: Madison, WI
latitude and longitude	43.033933 N 89.356452 W
isolation source	anaerobic bioreactor effluent
isolate	UW_MP_BIF7_1
broad-scale environmental context	bioreactor [ENVO:00002123]
local-scale environmental context	anaerobic bioreactor [ENVO:00002124]
environmental medium	biological waste material [ENVO:01000373]
altitude	268 m
ammonium	385.61 milligram per liter
dissolved oxygen	0 micromole per kilogram
pH	5.5
phosphate	missing
reference for biomaterial	3300043959_52
relationship to oxygen	anaerobe
sample collection device or method	Syringe
sample material processing	Biomass centrifuged 10 min 10,000xg, aliquot frozen for DNA extraction
sample size	2 milliliter
sample storage location	Freezer
sample storage temperature	-80 degree Celcius
source material identifiers	USB_126
temperature	21 degree Celcius
sample type	metagenomic assembly
metagenome source	bioreactor sludge metagenome
derived from	SAMN22064483
metagenomic	1
environmental-sample	1

Description

Improved metagenome assembled genome from a ultra-filtered-milk-permeate fermenting bioreactor. This bioreactor was operated as a upflow sludge blanket reactor with a 1.4 day hydraulic retention time and dynamic solids retention time. It was operated under anaerobic conditions and was fed ultra-filtered milk permeate, ammended with 300 mg N-NH4Cl/L. This sample was from the 126 day of operation.

Keywords: GSC:MIxS;MIMAG:6.0