Lactobacillus MAG, UW_TS_LAC3_5

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Result Filters

Organism: Lactobacillus sp.
cellular organisms; Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; unclassified Lactobacillus

Attributes

collection date	2019-10-23
geographic location	USA: Madison, WI
latitude and longitude	43.073847 N 89.413972 W
isolation source	anaerobic bioreactor effluent; Thin stillage fed, 6 d SRT, 35C, pH 5.5
isolate	UW_TS_LAC3_5
broad-scale environmental context	bioreactor [ENVO:00002123]
local-scale environmental context	anaerobic bioreactor [ENVO:00002124]
environmental medium	biological waste material [ENVO:01000373]
altitude	287 m
ammonium	1289.86 milligram per liter
dissolved oxygen	0 micromole per kilogram
pH	5.42
reference for biomaterial	3300043960_29
relationship to oxygen	anaerobe
sample collection device or method	Syringe
sample material processing	Biomass centrifuged 10 min 10,000xg, aliquot frozen for DNA extraction
sample size	1.5 milliliter
sample storage location	Freezer
sample storage temperature	-80 degree Celcius
source material identifiers	R1_75
temperature	35 degree Celcius
sample type	metagenomic assembly
metagenome source	bioreactor sludge metagenome
derived from	SAMN22064458
experimental factor	Thin stillage fed, 6 d SRT, 35C, pH 5.5
metagenomic	1
environmental-sample	1

Description

Improved metagenome assembled genome from a thin stillage fermenting bioreactor

Keywords: GSC:MIxS;MIMAG:6.0

BioProject: PRJNA768557 bioreactor sludge metagenome
Retrieve all samples from this project

Lactobacillus MAG, UW_TS_LAC3_5
Lactobacillus MAG, UW_TS_LAC3_5

biosample
Solobacterium MAG, UW_TS_BUL2_4
Solobacterium MAG, UW_TS_BUL2_4

biosample
PREDICTED: Danio rerio rabphilin 3A homolog (mouse), a (rph3aa), transcript vari...
PREDICTED: Danio rerio rabphilin 3A homolog (mouse), a (rph3aa), transcript variant X2, mRNA
gi|2800547539|ref|XM_005172602.5|

Nucleotide
Mus musculus ATP-synthase subunit D mRNA, complete cds
Mus musculus ATP-synthase subunit D mRNA, complete cds
gi|19070696|gb|AF354051.1|

Nucleotide
Mus musculus adult male aorta and vein cDNA, RIKEN full-length enriched library,...
Mus musculus adult male aorta and vein cDNA, RIKEN full-length enriched library, clone:A530014E20 product:PRE-MRNA SPLICING FACTOR PRP17 homolog [Mus musculus], full insert sequence
gi|26087999|dbj|AK040680.1|

Nucleotide

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