One Health Enteric sample from Escherichia coli

Identifiers: BioSample: SAMN31087410; Sample name: WUR_ESBL_2021-ESBL4583

Organism: Escherichia coli
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia

Package: One Health Enteric; version 1.0

Attributes

strain	ESBL4583
collected by	Wageningen Food Safety Research
collection date	2021
geographic location	Netherlands
isolation source	retail chicken
source type	food
purpose of sampling	AMR monitoring
project name	Monitoring of Antimicrobial Resistance and Antimicrobial Usage in Animals in the Netherlands in 2021
sequenced by	Wageningen Food Safety Research
food product origin geographic location	Netherlands
intended consumer	human as food consumer
food source	Chicken

BioProject: PRJNA885502
Retrieve all samples from this project

Submission: Wageningen Bioveterinary Research, Michael Brouwer; 2022-09-29

Antibiogram
Antibiotic	Resistance phenotype	Measurement sign	Measurement	Measurement units	Laboratory typing method	Laboratory typing platform	Vendor	Laboratory typing method version or reagent	Testing standard
amikacin	susceptible	<=	4	mg/L	MIC	Sensititre	Trek	96-Well Plate	EUCAST
ampicillin	resistant	>	32	mg/L	MIC	Sensititre	Trek	96-Well Plate	EUCAST
azithromycin	susceptible	==	8	mg/L	MIC	Sensititre	Trek	96-Well Plate	EUCAST
chloramphenicol	susceptible	<=	8	mg/L	MIC	Sensititre	Trek	96-Well Plate	EUCAST
ciprofloxacin	resistant	==	1	mg/L	MIC	Sensititre	Trek	96-Well Plate	EUCAST
colistin	susceptible	<=	1	mg/L	MIC	Sensititre	Trek	96-Well Plate	EUCAST
cefotaxime	resistant	==	8	mg/L	MIC	Sensititre	Trek	96-Well Plate	EUCAST
gentamicin	susceptible	==	1	mg/L	MIC	Sensititre	Trek	96-Well Plate	EUCAST
meropenem	susceptible	==	0.03	mg/L	MIC	Sensititre	Trek	96-Well Plate	EUCAST
nalidixic acid	resistant	>	64	mg/L	MIC	Sensititre	Trek	96-Well Plate	EUCAST
sulfamethoxazole	susceptible	<=	8	mg/L	MIC	Sensititre	Trek	96-Well Plate	EUCAST
ceftazidime	resistant	==	8	mg/L	MIC	Sensititre	Trek	96-Well Plate	EUCAST
tetracycline	susceptible	<=	2	mg/L	MIC	Sensititre	Trek	96-Well Plate	EUCAST
tigecycline	susceptible	<=	0.25	mg/L	MIC	Sensititre	Trek	96-Well Plate	EUCAST
trimethoprim	susceptible	==	1	mg/L	MIC	Sensititre	Trek	96-Well Plate	EUCAST
ertapenem	susceptible	==	0.03	mg/L	MIC	Sensititre	Trek	96-Well Plate	EUCAST
cefotaxime-clavulanic acid	resistant	==	8/4	mg/L	MIC	Sensititre	Trek	96-Well Plate	EUCAST
cefepime	susceptible	==	0.12	mg/L	MIC	Sensititre	Trek	96-Well Plate	EUCAST
cefoxitin	resistant	==	64	mg/L	MIC	Sensititre	Trek	96-Well Plate	EUCAST
imipenem	susceptible	<=	0.12	mg/L	MIC	Sensititre	Trek	96-Well Plate	EUCAST
ceftazidime-clavulanic acid	resistant	==	4/4	mg/L	MIC	Sensititre	Trek	96-Well Plate	EUCAST
temocillin	susceptible	==	8	mg/L	MIC	Sensititre	Trek	96-Well Plate	EUCAST

Accession:: SAMN31087410
ID:: 31087410

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One Health Enteric sample from Escherichia coli

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