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Animal sample from Emys orbicularis (European pond turtle) for VGP genome rEmyOrb1

Identifiers
BioSample: SAMN31805221; Sample name: Animal sample from Emys orbicularis (European pond turtle) for VGP genome rEmyOrb1; SRA: SRS18701668
Organism
Emys orbicularis (European pond turtle)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Emys
Package
Model organism or animal; version 1.0
Attributes
isolaterEmyOrb1
development stageadult
sexfemale
tissueblood
biomaterial providerUniversity of Florence
collected byClaudio Ciofi
collection date2019-08-01
geographic locationItaly: Reserve Naturale Monte Rufeno
latitude and longitude42.78473 N 11.88612 E
storage conditions-80oC
treatmentEDTA flash frozen in liquid nitrogen
Description

The European pond turtle (Emys orbicularis) is a long-living freshwater turtle in the family Emydidae, and is endemic to the Western Palearctic, namely southern and central Europe, West Asia and North Africa (from Wikipedia entry). This sample is from a female at a Nature Reserve in Italy, collected by Claudio Ciofi, to generate a high-quality reference for the Vertebrate Genomes Project (VGP). Sequencing and genome assembly were conducted at the University of Florence in Italy led by Ciofi and the Vertebrate Genomes Lab (VGL) at the Rockefeller University, led by Olivier Fedrigo and Erich D. Jarvis, with support from Ciofi and Jarvis.

BioProjects
PRJNA1107594 Emys orbicularis RefSeq BioProject
Retrieve all samples from this project

PRJNA1008601
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PRJNA919152 Emys orbicularis isolate:rEmyOrb1
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PRJNA919101 Emys orbicularis isolate:rEmyOrb1
Retrieve all samples from this project

Submission
G10K, Erich Jarvis; 2022-11-20
Accession:
SAMN31805221
ID:
31805221

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