Pathogen: clinical or host-associated sample from ... - BioSample

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Pathogen: clinical or host-associated sample from Serratia marcescens

Identifiers: BioSample: SAMN36726423; Sample name: BWH_96_S_mar; SRA: SRS18432360

Organism: Serratia marcescens
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Serratia

Package: Pathogen: clinical or host-associated; version 1.0

Attributes

isolate	BWH_96_S_mar
collected by	Brigham and Women's Hospital
collection date	2022
geographic location	USA:Boston
host	Homo sapiens
host disease	Respiratory tract infection
isolation source	Bronchial alveolar lavage
latitude and longitude	42.3362 N 71.1067 W
host age	55

BioProject: PRJNA278886
Retrieve all samples from this project

Submission: Brigham and Women's Hospital, Jay Worley; 2023-07-27

Antibiogram
Antibiotic	Resistance phenotype	Measurement sign	Measurement	Measurement units	Laboratory typing method	Laboratory typing platform	Vendor	Laboratory typing method version or reagent	Testing standard
amikacin	resistant	>=	64	mg/L	MIC	Vitek	Biomérieux	96-Well Plate	CLSI
amoxicillin-clavulanic acid	resistant	>=	32/16	mg/L	MIC	Vitek	Biomérieux	96-Well Plate	CLSI
cefepime	resistant	>=	64	mg/L	MIC	Vitek	Biomérieux	96-Well Plate	CLSI
cefoxitin	resistant	>=	64	mg/L	MIC	Vitek	Biomérieux	96-Well Plate	CLSI
ceftaroline	susceptible	==	1.0	mg/L	MIC	Vitek	Biomérieux	96-Well Plate	CLSI
ceftazidime	resistant	>=	64	mg/L	MIC	Vitek	Biomérieux	96-Well Plate	CLSI
ceftriaxone	resistant	>=	64	mg/L	MIC	Vitek	Biomérieux	96-Well Plate	CLSI
ciprofloxacin	resistant	==	2.0	mg/L	MIC	Vitek	Biomérieux	96-Well Plate	CLSI
clindamycin	resistant	>=	4	mg/L	MIC	Vitek	Biomérieux	96-Well Plate	CLSI
ertapenem	resistant	>=	8	mg/L	MIC	Vitek	Biomérieux	96-Well Plate	CLSI
erythromycin	resistant	>=	8	mg/L	MIC	Vitek	Biomérieux	96-Well Plate	CLSI
gentamicin	resistant	>=	16	mg/L	MIC	Vitek	Biomérieux	96-Well Plate	CLSI
levofloxacin	resistant	==	2.0	mg/L	MIC	Vitek	Biomérieux	96-Well Plate	CLSI
linezolid	susceptible	==	2.0	mg/L	MIC	Vitek	Biomérieux	96-Well Plate	CLSI
meropenem	resistant	>=	16	mg/L	MIC	Vitek	Biomérieux	96-Well Plate	CLSI
minocycline	susceptible	<=	0.5	mg/L	MIC	Vitek	Biomérieux	96-Well Plate	CLSI
moxifloxacin	resistant	>=	8	mg/L	MIC	Vitek	Biomérieux	96-Well Plate	CLSI
oxacillin	resistant	>=	4	mg/L	MIC	Vitek	Biomérieux	96-Well Plate	CLSI
piperacillin-tazobactam	resistant	>=	128/4	mg/L	MIC	Vitek	Biomérieux	96-Well Plate	CLSI
rifampin	susceptible	<=	0.5	mg/L	MIC	Vitek	Biomérieux	96-Well Plate	CLSI
tetracycline	resistant	>=	16	mg/L	MIC	Vitek	Biomérieux	96-Well Plate	CLSI
tigecycline	susceptible	<=	0.12	mg/L	MIC	Vitek	Biomérieux	96-Well Plate	CLSI
tobramycin	resistant	>=	16	mg/L	MIC	Vitek	Biomérieux	96-Well Plate	CLSI
trimethoprim-sulfamethoxazole	resistant	>=	16/304	mg/L	MIC	Vitek	Biomérieux	96-Well Plate	CLSI
vancomycin	susceptible	==	1.0	mg/L	MIC	Vitek	Biomérieux	96-Well Plate	CLSI