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Animal sample from Osmerus mordax (rainbow smelt) for VGP reference genome, fOsmMor3

Identifiers
BioSample: SAMN40867348; Sample name: Animal sample from Osmerus mordax (rainbow smelt) for VGP reference genome, fOsmMor3; SRA: SRS22162649
Organism
Osmerus mordax (rainbow smelt)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Stomiati; Osmeriformes; Osmeridae; Osmerinae; Osmerus
Package
Model organism or animal; version 1.0
Attributes
isolatefOsmMor3
development stageadult
collection date2019-10-17
geographic locationCanada: Placentia Bay Newfoundland
sexmale
tissuemuscle, testes, liver, kidney, brain, misc
biomaterial providerFisheries and Oceans Canada: Ian Bradbury
collected byAmber Messmer
latitude and longitude47.431645 N 53.826133 W
storage conditions-80oC
treatmentflash frozen
Description

The rainbow smelt (Osmerus mordax) is a North American species of fish of the family Osmeridae. The North American native range of the rainbow smelt extends through the Atlantic drainages between New Jersey and Labrador to Arctic drainages, and the Pacific drainages as far south as Vancouver Island (from Wikipedia entry). This sample of a male individual found in Canada was procured by Ian Bradbury and Amber Messmer to generate a high-quality reference genome for the Vertebrate Genomes Project (VGP). Sequencing and genome assembly were conducted at the Vertebrate Genome Lab (VGL) at the Rockefeller University, led by Erich D. Jarvis, Giulio Formenti, and Jennifer Balacco.

BioProjects
PRJNA1145451 Osmerus mordax
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PRJNA1141632
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PRJNA1098709 Osmerus mordax isolate:fOsmMor3
Retrieve all samples from this project

PRJNA1098708 Osmerus mordax isolate:fOsmMor3
Retrieve all samples from this project

Submission
G10K, Erich Jarvis; 2024-04-08
Accession:
SAMN40867348
ID:
40867348

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