SARS-CoV-2 sequencing of wastewater

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Result Filters

Identifiers: BioSample: SAMN41874286; SRA: SRS21651592; us-cdc-nwss: 0PD00004_05122024

Organism: wastewater metagenome
unclassified entries; unclassified sequences; metagenomes; ecological metagenomes

Attributes

sample name	0PD00004_05122024
collection date	2024-05-12
isolation source	wastewater
geographic location	USA: Ohio
wastewater population	12000
wastewater sample duration	24
wastewater sample matrix	raw wastewater
wastewater sample type	composite
wastewater surveillance target 1	SARS-CoV-2
wastewater surveillance target 1 known present	no
project name	GenomeTrakr; LFFM ww project
collected by	Ohio Department of Health
sequenced by	The Ohio State University Infectious Diseases Institute
wastewater sample site	wastewater treatment plant
wastewater surveillance jurisdiction	oh
wastewater surveillance system sample ID	0PD00004_05122024
wastewater population source	utility provided information
purpose of wastewater sampling	public health surveillance community-level
wastewater surveillance target 1 concentration	6500.0
wastewater surveillance target 1 conc unit	copies/L
wastewater surveillance target 1 gene	N gene (N2)
wastewater surveillance target 1 protocol	GT-Digital SARS-CoV-2 Wastewater Surveillance Assay For QIAcuity dPCR
wastewater flow	6794814.152
collection_site_id	OH0024775
concentration_method	ceres nanotrap
extraction_method	qiagen allprep powerviral dna/rna kit
extraction_control	bcov vaccine