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Pathogen: clinical or host-associated sample from Cyprinid herpesvirus 3

Identifiers
BioSample: SAMN42006672; Sample name: KHV_Italy; SRA: SRS21719014
Organism
Cyprinid herpesvirus 3
Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes; Herpesvirales; Alloherpesviridae; Cyvirus; Cyvirus cyprinidallo3
Package
Pathogen: clinical or host-associated; version 1.0
Attributes
strainCyHV-3 (#197/ITT-V12)
isolateItalian
collected byIstituto Zooprofilattico delle Venezie
collection date2012-04-01
geographic locationItaly: North-Eastern Italy
hostCyprinus carpio koi
host diseaseKoi herpesvirus disease
isolation sourceIn vitro cell culture
latitude and longitude45.9295 N 11.5621 E
genotypeUnited states or Israel (KHV-I)
host age12 to 18 months
host descriptionMedium size koi (20-30cm). Large size koi (>35cm)
host disease outcomeEnophthalmia, skin erosion, gill hemorrhages and necrosis, pale and enlarged kidney.
host disease stageClinical
host health stateMoribund fish with gill and skin lession
host sexNot applicable
host subject idNot applicable
host tissue sampledGill and kidney
passage history26 passages on CCB cells
pathotypeNot applicable
serotypeNot applicable
serovarNot applicable
specimen voucherNot applicable
subgroupNot collected
subtypeNot applicable
Description

Small RNAs (miRNAs) extracted from the cell pellets

BioProject
PRJNA287728 Cyprinid herpesvirus 3
Retrieve all samples from this project

Submission
Institut de recherche pour le Developpement, Jean-Christophe Avarre; 2024-06-24
Accession:
SAMN42006672
ID:
42006672

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