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Animal sample from Lampris incognitus (smalleye Pacific opah) for VGP genome, fLamInc1

Identifiers
BioSample: SAMN34060140; Sample name: Animal sample from Lampris incognitus (smalleye Pacific opah) for VGP genome, fLamInc1
Organism
Lampris incognitus (smalleye Pacific opah)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Lampridacea; Lampriformes; Lampridae; Lampris
Package
Model organism or animal; version 1.0
Attributes
isolatefLamInc1
development stageadult
sexmale
tissueblood
biomaterial providerNOAA fisheries
collected byNick Wegner
collection date2012-07-18
geographic locationUSA: Pacific, San Diego Coast
latitude and longitude32.650833 N 117.533611 W
Source ID687-82
Description

The smalleye Pacific opah (Lampris incognitus) is a fish species endemic to central and northeast Pacific, and is one of five subspecies of Lampris guttatus. This sample from the Pacific Ocean, along the coast of San Diego, was collected by Nick Wegner of NOAA fisheries in San Diego CA, and coordinated by Lisa Komoroske and Byrappa Venkatesh to be used to generate a high-quality reference genome for the Vertebrate Genomes Project (VGP). Sequencing and genome assembly were conducted at the Vertebrate Genomes Lab (VGL) at the Rockefeller University, led by Olivier Fedrigo and Erich D. Jarvis, with funding support from Jarvis.

BioProjects
PRJNA974016 Lampris incognitus (smalleye Pacific opah)
Retrieve all samples from this project

PRJNA951789 Lampris incognitus isolate:fLamInc1
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PRJNA951788 Lampris incognitus isolate:fLamInc1
Retrieve all samples from this project

Submission
G10K, Erich Jarvis; 2023-04-03
Accession:
SAMN34060140
ID:
34060140

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