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Animal sample from Macaca nemestrina (pig-tailed macaque) for VGP reference genome, mMacNem1

Identifiers
BioSample: SAMN41827875; Sample name: Animal sample from Macaca nemestrina (pig-tailed macaque) for VGP reference genome, mMacNem1; SRA: SRS22219854
Organism
Macaca nemestrina (pig-tailed macaque)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca
Package
Model organism or animal; version 1.0
Attributes
isolatemMacNem1
development stageadult
collection date2021-05-12
geographic locationUSA: Seattle, Washington
sexmale
tissueblood
biomaterial providerAllen Institute for Brain Science: Rebecca Hodge
collected byWashington National Primate Research Center (WaNPRC) at the University of Washington
latitude and longitude47.655548 N 122.303200 W
storage conditions-80oC
treatmentfrozen
Description

The southern pig-tailed macaque (Macaca nemestrina) is a medium-sized macaque that lives in Sundaland, southern Thailand, Malaysia, and Indonesia. This macaque has buff-brown fur, with a darker dorsal area and lighter ventral area. Its common name refers to the short tail held semi-erect, resembling the tail of a pig (from Wikipedia entry). This sample is from a male individual bred at the Washington National Primate Research Center (WaNPRC) at the University of Washington in Seattle. The sample was procured by Rebecca Hodge and coordinated by Trygve Bakken, Ed Lein, and Rebecca Hodge at the Allen Institute for Brain Science to generate a high-quality reference genome for an Allen Institute motor cortex project and for the Vertebrate Genomes Project (VGP). Sequencing and genome assembly were conducted at the Vertebrate Genome Lab (VGL) at the Rockefeller University, led by Erich D. Jarvis, Giulio Formenti, and Jennifer Balacco.

BioProjects
PRJNA1142592
Retrieve all samples from this project

PRJNA1123829 Macaca nemestrina isolate:mMacNem1
Retrieve all samples from this project

PRJNA1123828 Macaca nemestrina isolate:mMacNem1
Retrieve all samples from this project

Submission
G10K, Erich Jarvis; 2024-06-13
Accession:
SAMN41827875
ID:
41827875

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