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Pathogen: environmental/food/other sample from Escherichia coli

Identifiers: BioSample: SAMN10221591; Sample name: CVM N17EC1302; SRA: SRS3967791

Organism: Escherichia coli
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia

Package: Pathogen: environmental/food/other; version 1.0

Attributes

strain	CVM N17EC1302
collected by	FDA
collection date	2017
geographic location	USA:OR
isolation source	Ground Beef
latitude and longitude	missing

BioProject: PRJNA292663 Escherichia coli
Retrieve all samples from this project

Submission: FDA-CVM, CVM FDA; 2018-10-09

Antibiogram
Antibiotic	Resistance phenotype	Measurement sign	Measurement	Measurement units	Laboratory typing method	Laboratory typing platform	Vendor	Laboratory typing method version or reagent	Testing standard
amoxicillin-clavulanic acid	susceptible	==	2/1	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
ampicillin	susceptible	==	2	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
azithromycin	susceptible	==	2	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
cefoxitin	susceptible	==	4	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
ceftriaxone	susceptible	<=	0.25	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
chloramphenicol	susceptible	==	4	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
ciprofloxacin	susceptible	<=	0.015	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
gentamicin	susceptible	==	1	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
meropenem	susceptible	<=	0.06	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
nalidixic acid	susceptible	==	2	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
streptomycin	susceptible	==	4	mg/L	MIC	Sensititre	Trek	GM-NEG	NARMS
sulfisoxazole	susceptible	<=	16	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
tetracycline	susceptible	<=	4	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
trimethoprim-sulfamethoxazole	susceptible	<=	0.12/2.38	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI

Accession:: SAMN10221591
ID:: 10221591

BioProject SRA Nucleotide

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BioSample links for Nucleotide (Select 1517386569) (1)
BioSample
Pathogen: environmental/food/other sample from Escherichia coli
Pathogen: environmental/food/other sample from Escherichia coli

biosample
Taxonomy Links for Nucleotide (Select 1516389013) (1)
Taxonomy
TRIM71 tripartite motif containing 71 [Homo sapiens]
TRIM71 tripartite motif containing 71 [Homo sapiens]
Gene ID:131405

Gene
Gene Links for GEO Profiles (Select 126469565) (1)
Gene

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