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BioSample

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Pathogen: environmental/food/other sample from Escherichia coli

Identifiers: BioSample: SAMN10221463; Sample name: CVM N17EC1044; SRA: SRS3968136

Organism: Escherichia coli
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia

Package: Pathogen: environmental/food/other; version 1.0

Attributes

strain	CVM N17EC1044
collected by	FDA
collection date	2017
geographic location	USA:SD
isolation source	ground turkey
latitude and longitude	missing

BioProject: PRJNA292663 Escherichia coli
Retrieve all samples from this project

Submission: FDA-CVM, CVM FDA; 2018-10-09

Antibiogram
Antibiotic	Resistance phenotype	Measurement sign	Measurement	Measurement units	Laboratory typing method	Laboratory typing platform	Vendor	Laboratory typing method version or reagent	Testing standard
amoxicillin-clavulanic acid	resistant	==	32/16	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
ampicillin	resistant	>	32	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
azithromycin	susceptible	==	4	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
cefoxitin	resistant	>	32	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
ceftriaxone	resistant	==	16	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
chloramphenicol	susceptible	==	4	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
ciprofloxacin	susceptible	<=	0.015	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
gentamicin	susceptible	==	1	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
meropenem	susceptible	<=	0.06	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
nalidixic acid	susceptible	==	4	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
streptomycin	susceptible	==	8	mg/L	MIC	Sensititre	Trek	GM-NEG	NARMS
sulfisoxazole	susceptible	<=	16	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
tetracycline	resistant	>	32	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
trimethoprim-sulfamethoxazole	susceptible	<=	0.12/2.38	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI

Accession:: SAMN10221463
ID:: 10221463

BioProject SRA Nucleotide

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Pathogen: environmental/food/other sample from Escherichia coli
Pathogen: environmental/food/other sample from Escherichia coli

biosample
BioSample links for Nucleotide (Select 1517386747) (1)
BioSample
BioSample links for Nucleotide (Select 1517386569) (1)
BioSample
Taxonomy Links for Nucleotide (Select 1516389013) (1)
Taxonomy
TRIM71 tripartite motif containing 71 [Homo sapiens]
TRIM71 tripartite motif containing 71 [Homo sapiens]
Gene ID:131405

Gene

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