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Microbe sample from Candidatus Atribacteria bacterium

Identifiers: BioSample: SAMN09639074; Sample name: Uncultivated Candidatus Atribacteria bacterium SpSt-1160 genome recovered from SRR5216255; SRA: SRS3740887

Organism: Candidatus Atribacteria bacterium
cellular organisms; Bacteria; Atribacterota; Atribacteria; unclassified Atribacteria

Package: Microbe; version 1.0

Attributes

isolate	SpSt-1160
isolation source	hot spring sediment
collection date	2014-09-02
geographic location	USA: California
sample type	metagenomic assembly
latitude and longitude	39.0314 N 122.4323 W
subsource note	Metagenome-assembled genome binned from sequencing reads available in SRR5216255
metagenome source	sediment metagenome
assembly_method_and_version	DOE-JGI IMG deposited assembly (IMG Genome ID: 3300010291)
completeness_estimated	48.1
contamination_estimated	1.69
quality_assessment_method_and_version	CheckM v1.0.7
environmental-sample	true
genome_coverage	14.15
mapping_method_and_version	Bowtie 2 v2.2.8
metagenomic	true

BioProject: PRJNA480137 metagenomes
Retrieve all samples from this project

Submission: The University of Hong Kong, Zhichao Zhou; 2018-07-11

Accession:: SAMN09639074
ID:: 9639074

BioProject SRA Nucleotide

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BioSample links for Nucleotide (Select 1817474147) (1)
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Microbe sample from Candidatus Atribacteria bacterium
Microbe sample from Candidatus Atribacteria bacterium

biosample
Escherichia coli strain G32 NODE_794_length_302_cov_1.49778, whole genome shotgu...
Escherichia coli strain G32 NODE_794_length_302_cov_1.49778, whole genome shotgun sequence
gi|1797587992|ref|NZ_VDKR01000791.1 |WGS:NZ_VDKR01|NODE_794_length_302_cov_1.49778

Nucleotide
Taxonomy Links for Nucleotide (Select 1817474147) (1)
Taxonomy
MULTISPECIES: D-proline reductase (dithiol) protein PrdB [Clostridia]
MULTISPECIES: D-proline reductase (dithiol) protein PrdB [Clostridia]
gi|500188531|ref|WP_011861888.1|

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