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Microbe sample from Thermoplasmatales archaeon

Identifiers
BioSample: SAMN09638591; Sample name: Uncultivated Thermoplasmatales archaeon HyVt-397 genome recovered from SRR3669912 and SRR3679449; SRA: SRS3740897
Organism
Thermoplasmatales archaeon
cellular organisms; Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata; Thermoplasmatales; unclassified Thermoplasmatales
Package
Microbe; version 1.0
Attributes
isolateHyVt-397
isolation sourcehydrothermal sediments
collection date2009-12
geographic locationMexico: Guaymas Basin, Gulf of California
sample typemetagenomic assembly
latitude and longitude27.100437 N 111.124548 W
subsource noteMetagenome-assembled genome binned from sequencing reads available in SRR3669912 and SRR3679449
metagenome sourcehydrothermal vent metagenome
assembly_method_and_versionMEGAHIT v1.1.2
completeness_estimated59.55
contamination_estimated1.47
quality_assessment_method_and_versionCheckM v1.0.7
environmental-sampletrue
genome_coverage1.97
mapping_method_and_versionBowtie 2 v2.2.8
metagenomictrue
BioProject
PRJNA480137 metagenomes
Retrieve all samples from this project

Submission
The University of Hong Kong, Zhichao Zhou; 2018-07-11
Accession:
SAMN09638591
ID:
9638591

BioProject SRA Nucleotide

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