Assembly for Limosilactobacillus_sp_nov1_DSM110982 - BioSample - NCBI

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Assembly for Limosilactobacillus_sp_nov1_DSM110982

Identifiers: BioSample: SAMEA14418534; SRA: ERS12024096

Organism: Limosilactobacillus caecicola
cellular organisms; Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae; Limosilactobacillus

Attributes

collection date	2019-04-15
broad-scale environmental context	mouse gastrointestinal tract
local-scale environmental context	mouse intestine
environmental medium	gut content
geographic location	Germany
host taxonomy ID	10090 (10090)
investigation type	single amplified genome
project name	Enriched cultured diversity of the mouse gut microbiota for custom-made synthetic communities
sample name	Limosilactobacillus_sp_nov1_DSM110982
ENA first public	2022-05-20
ENA last update	2022-05-20
ENA-CHECKLIST	ERC000013
External Id	SAMEA14418534
INSDC center alias	RWTH Aachen University Hospital
INSDC center name	RWTH Aachen University Hospital
INSDC first public	2022-05-20T16:20:31Z
INSDC last update	2022-05-20T16:20:31Z
INSDC status	public
Submitter Id	Limosilactobacillus_sp_nov1_DSM110982
geographic location (latitude)	50.776389
geographic location (longitude)	6.043611
host-associated environmental package	host-associated
sequencing method	Illumina NextSeq500

Description: Genome of pure isolate Limosilactobacillus_sp_nov1_DSM110982 cultured from mouse cecal content

BioProject: PRJEB50452 Expanding the mouse intestinal bacterial collection (miBC)
Retrieve all samples from this project

Submission: EBI; 2022-05-21

Accession:: SAMEA14418534
ID:: 28576259

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BioSample links for Nucleotide (Select 2250787251) (1)
BioSample
Assembly for Limosilactobacillus_sp_nov1_DSM110982
Assembly for Limosilactobacillus_sp_nov1_DSM110982

biosample
Taxonomy Links for Nucleotide (Select 2254370656) (1)
Taxonomy
Protein Links for PopSet (Select 1996428713) (77)
Protein
Limosilactobacillus caecicola strain DSM 110982 NODE_4_length_155703_cov_400.891...
Limosilactobacillus caecicola strain DSM 110982 NODE_4_length_155703_cov_400.891541, whole genome shotgun sequence
gi|2254370610|ref|NZ_CALPCI01000000 gnl|WGS:NZ_CALPCI01|NODE_4_length_155703_cov_400.891541

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